The Tour of Collective Wisdom presents:
Desert Island Protecting Groups


Choosing a good protecting group for your molecule can save a lot of time. The choices, however, are often overwhelming (T. Green, Protecting Groups in Organic Synthesis). Protecting groups are listed below in order of popularity.

Protecting group:
I often use this I sometimes use this I avoid this
Verification:
Protecting group Use this often Use this sometimes Avoid using this I use this...
t-butoxycarbonyl (BOC)157395 often sometimes avoid
t-butyldimethylsilyl (TBS or TBDMS)1383721 often sometimes avoid
benzyl72438 often sometimes avoid
acetyl554716 often sometimes avoid
benzyloxycarbonyl (CBZ)494413 often sometimes avoid
p-methoxybenzyl (PMB)393614 often sometimes avoid
triisopropylsilyl (TIPS)26298 often sometimes avoid
t-butyldiphenylsilyl (TBDPS)26269 often sometimes avoid
methyl ester1463 often sometimes avoid
Trimethylsilane (TMS)283418 often sometimes avoid
9-fluorenyl methyloxycarbonyl (FMOC)292620 often sometimes avoid
t-butyldimethylsilyl (TBS or TBDMS)530 often sometimes avoid
t-butoxycarbonyl (BOC)500 often sometimes avoid
1,3-dioxolane753 often sometimes avoid
benzyl410 often sometimes avoid
benzyl ether (OBn)400 often sometimes avoid
allyl ester573 often sometimes avoid
Trifluoroacetyl573 often sometimes avoid
cbz240 often sometimes avoid
Trichloroacetyl453 often sometimes avoid
triethylsilyl (TES)261 often sometimes avoid
2,2-dimethoxypropane554 often sometimes avoid
dioxolane656 often sometimes avoid
pmbs020 often sometimes avoid
t-butyl ester575 often sometimes avoid
benzylidene7108 often sometimes avoid
DMAS124 often sometimes avoid
isopropylidene5138 often sometimes avoid
TEOC 2-(trimethylsilyl) ethoxycarbonyl297 often sometimes avoid
allyloxycarbonyl (alloc)7913 often sometimes avoid
pivaloyl123319 often sometimes avoid
trityl92916 often sometimes avoid
beta-methoxyethoxymethyl chloride5815 often sometimes avoid
TMSE 2 (trimethylsilyl) ethyl31115 often sometimes avoid
methoxymethyl (MOM)113224 often sometimes avoid
trichloroethoxycarbonyl (Troc)72020 often sometimes avoid
1,2 or 1,3 dithiane51020 often sometimes avoid
SEM 2 (trimethylsilyl) ethoxymethane111428 often sometimes avoid
tetrahydropyranyl (THP)133232 often sometimes avoid
2-naphthylmethyl (NAP)41125 often sometimes avoid
methyl172239 often sometimes avoid